Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-640 in MUC Ovarian Hendrix Cluster 20 Table contains all genes in the MUC Ovarian Hendrix cluster number 20. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-640 7766 ZNF223 zinc finger protein 223 [Source:HGNC Symbol;Acc:13016] zzz999 11212 PROSC proline synthetase co-transcribed homolog (bacterial) [Source:HGNC Symbol;Acc:9457] T 79929 MAP6D1 MAP6 domain containing 1 [Source:HGNC Symbol;Acc:25753] T 653659 TMEM183A transmembrane protein 183A [Source:HGNC Symbol;Acc:20173] T 9014 TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa [Source:HGNC Symbol;Acc:11533] T 79897 RPP21 ribonuclease P/MRP 21kDa subunit [Source:HGNC Symbol;Acc:21300] zzz999 8544 PIR pirin (iron-binding nuclear protein) [Source:HGNC Symbol;Acc:30048] zzz999 9559 VPS26A vacuolar protein sorting 26 homolog A (S. pombe) [Source:HGNC Symbol;Acc:12711] zzz999 9214 FAIM3 Fas apoptotic inhibitory molecule 3 [Source:HGNC Symbol;Acc:14315] zzz999 9607 CARTPT CART prepropeptide [Source:HGNC Symbol;Acc:24323] zzz999 55705 IPO9 importin 9 [Source:HGNC Symbol;Acc:19425] T 55827 DCAF6 DDB1 and CUL4 associated factor 6 [Source:HGNC Symbol;Acc:30002] P T 57147 SCYL3 SCY1-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:19285] zzz999 3707 ITPKB inositol-trisphosphate 3-kinase B [Source:HGNC Symbol;Acc:6179] zzz999 9917 FAM20B family with sequence similarity 20, member B [Source:HGNC Symbol;Acc:23017] T 8287 USP9Y ubiquitin specific peptidase 9, Y-linked [Source:HGNC Symbol;Acc:12633] zzz999 51430 C1orf9 chromosome 1 open reading frame 9 [Source:HGNC Symbol;Acc:1240] T 79269 DCAF10 DDB1 and CUL4 associated factor 10 [Source:HGNC Symbol;Acc:23686] T 8703 B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 [Source:HGNC Symbol;Acc:926] zzz999 57645 POGK pogo transposable element with KRAB domain [Source:HGNC Symbol;Acc:18800] zzz999 57415 C3orf14 chromosome 3 open reading frame 14 [Source:HGNC Symbol;Acc:25024] zzz999 11266 DUSP12 dual specificity phosphatase 12 [Source:HGNC Symbol;Acc:3067] zzz999 79595 SAP130 Sin3A-associated protein, 130kDa [Source:HGNC Symbol;Acc:29813] zzz999 51018 RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24255] T 10477 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) [Source:HGNC Symbol;Acc:12479] zzz999 8677 STX10 syntaxin 10 [Source:HGNC Symbol;Acc:11428] zzz999 6478 SIAH2 seven in absentia homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:10858] zzz999 2288 FKBP4 FK506 binding protein 4, 59kDa [Source:HGNC Symbol;Acc:3720] zzz999 6095 RORA RAR-related orphan receptor A [Source:HGNC Symbol;Acc:10258] zzz999 9553 MRPL33 mitochondrial ribosomal protein L33 [Source:HGNC Symbol;Acc:14487] zzz999 140803 TRPM6 transient receptor potential cation channel, subfamily M, member 6 [Source:HGNC Symbol;Acc:17995] zzz999 5987 TRIM27 tripartite motif containing 27 [Source:HGNC Symbol;Acc:9975] T 64924 SLC30A5 solute carrier family 30 (zinc transporter), member 5 [Source:HGNC Symbol;Acc:19089] P T 493 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 [Source:HGNC Symbol;Acc:817] zzz999 9367 RAB9A RAB9A, member RAS oncogene family [Source:HGNC Symbol;Acc:9792] zzz999 7353 UFD1L ubiquitin fusion degradation 1 like (yeast) [Source:HGNC Symbol;Acc:12520] zzz999 3792 KEL Kell blood group, metallo-endopeptidase [Source:HGNC Symbol;Acc:6308] zzz999 4074 M6PR mannose-6-phosphate receptor (cation dependent) [Source:HGNC Symbol;Acc:6752] zzz999 2107 ETF1 eukaryotic translation termination factor 1 [Source:HGNC Symbol;Acc:3477] zzz999 4927 NUP88 nucleoporin 88kDa [Source:HGNC Symbol;Acc:8067] zzz999 7818 DAP3 death associated protein 3 [Source:HGNC Symbol;Acc:2673] zzz999 6470 SHMT1 serine hydroxymethyltransferase 1 (soluble) [Source:HGNC Symbol;Acc:10850] zzz999 10245 TIMM17B translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:HGNC Symbol;Acc:17310] zzz999 6627 SNRPA1 small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:11152] zzz999 27101 CACYBP calcyclin binding protein [Source:HGNC Symbol;Acc:30423] T 28952 CCDC22 coiled-coil domain containing 22 [Source:HGNC Symbol;Acc:28909] T 6198 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Source:HGNC Symbol;Acc:10436] zzz999 8804 CREG1 cellular repressor of E1A-stimulated genes 1 [Source:HGNC Symbol;Acc:2351] zzz999 27238 GPKOW G patch domain and KOW motifs [Source:HGNC Symbol;Acc:30677] zzz999 9804 TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) [Source:HGNC Symbol;Acc:20947] zzz999 92342 METTL18 methyltransferase like 18 [Source:HGNC Symbol;Acc:28793] zzz999 5202 PFDN2 prefoldin subunit 2 [Source:HGNC Symbol;Acc:8867] zzz999 1616 DAXX death-domain associated protein [Source:HGNC Symbol;Acc:2681] zzz999 9261 MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:6887] zzz999 4688 NCF2 neutrophil cytosolic factor 2 [Source:HGNC Symbol;Acc:7661] zzz999 9826 ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 [Source:HGNC Symbol;Acc:14580] zzz999 90121 TSR2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25455] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.